STRINGSTRING
btaf1 protein (Ciona intestinalis) - STRING interaction network
"btaf1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btaf1Uncharacterized protein (1355 aa)    
Predicted Functional Partners:
Cin.26664
Uncharacterized protein (316 aa)
       
  0.969
ENSCING00000011871
Uncharacterized protein (210 aa)
     
  0.929
ENSCING00000009221
Uncharacterized protein (572 aa)
   
0.918
ENSCING00000001643
Uncharacterized protein (279 aa)
       
  0.821
ENSCING00000025006
Uncharacterized protein (325 aa)
       
 
  0.820
ENSCING00000020364
Uncharacterized protein (145 aa)
     
 
  0.819
ENSCING00000022981
Uncharacterized protein (917 aa)
     
  0.802
swi/snf
SWI/SNF protein (1003 aa)
   
0.785
ENSCING00000007884
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1814 aa)
     
  0.781
kat2b
Uncharacterized protein (365 aa)
     
  0.759
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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