STRINGSTRING
gpd2 protein (Ciona intestinalis) - STRING interaction network
"gpd2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpd2Uncharacterized protein (683 aa)    
Predicted Functional Partners:
ENSCING00000006006
Uncharacterized protein (567 aa)
  0.950
ENSCING00000024592
Uncharacterized protein (185 aa)
         
  0.933
ENSCING00000009126
Uncharacterized protein (586 aa)
         
  0.933
ENSCING00000006320
Uncharacterized protein (512 aa)
  0.928
ENSCING00000006256
Uncharacterized protein (358 aa)
   
 
  0.912
ENSCING00000019107
Uncharacterized protein (581 aa)
   
 
  0.878
ENSCING00000019577
Uncharacterized protein (303 aa)
         
  0.844
ENSCING00000014180
Uncharacterized protein (378 aa)
   
 
  0.825
ENSCING00000011632
Uncharacterized protein (382 aa)
   
 
  0.825
ENSCING00000011528
Uncharacterized protein (281 aa)
   
 
  0.825
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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