STRINGSTRING
ENSCING00000001420 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000001420" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000001420Uncharacterized protein (392 aa)    
Predicted Functional Partners:
ENSCING00000005698
Uncharacterized protein (385 aa)
       
      0.561
ENSCING00000004167
Uncharacterized protein (342 aa)
       
      0.561
ENSCING00000000841
Uncharacterized protein (295 aa)
       
      0.561
zf(an1)-2
Uncharacterized protein; Zinc finger protein (260 aa)
       
      0.457
ENSCING00000022358
Uncharacterized protein ; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (303 aa)
           
  0.410
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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