STRINGSTRING
hsp40 protein (Ciona intestinalis) - STRING interaction network
"hsp40" - Heat shock protein 40 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsp40Heat shock protein 40 (313 aa)    
Predicted Functional Partners:
ENSCING00000009665
Uncharacterized protein (664 aa)
 
  0.974
hsp70
Heat shock protein 70 (627 aa)
 
  0.972
ENSCING00000009590
Uncharacterized protein (659 aa)
 
  0.971
ENSCING00000004937
Uncharacterized protein (543 aa)
     
 
  0.947
ENSCING00000019791
Uncharacterized protein (643 aa)
 
  0.946
hspa4l
Uncharacterized protein (839 aa)
 
  0.939
hspa12a
Uncharacterized protein (547 aa)
   
  0.928
ENSCING00000009445
Uncharacterized protein (671 aa)
 
  0.922
ENSCING00000013209
GrpE protein homolog ; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (215 aa)
   
 
  0.918
ENSCING00000012576
Uncharacterized protein (666 aa)
     
  0.916
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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