STRINGSTRING
Cin.24579 protein (Ciona intestinalis) - STRING interaction network
"Cin.24579" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.24579Uncharacterized protein (251 aa)    
Predicted Functional Partners:
ENSCING00000019988
Uncharacterized protein (1106 aa)
       
    0.747
ENSCING00000007275
Uncharacterized protein (1499 aa)
       
    0.747
ENSCING00000004085
Uncharacterized protein (417 aa)
   
  0.679
ENSCING00000016432
Uncharacterized protein (340 aa)
   
 
0.667
Cin.27802
Uncharacterized protein (1161 aa)
       
  0.663
ENSCING00000016470
Uncharacterized protein (607 aa)
       
  0.662
ENSCING00000006088
Uncharacterized protein (688 aa)
       
  0.662
cipc2
Similar to putative prohormone convertase 2 (660 aa)
       
  0.662
pcsk5
Uncharacterized protein (608 aa)
       
  0.662
ENSCING00000005940
Uncharacterized protein (435 aa)
       
  0.644
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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