STRINGSTRING
ENSCING00000001540 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000001540" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000001540Uncharacterized protein (216 aa)    
Predicted Functional Partners:
ENSCING00000007544
Uncharacterized protein (1596 aa)
     
  0.974
ENSCING00000011241
Uncharacterized protein (241 aa)
       
  0.954
ENSCING00000008645
Uncharacterized protein (245 aa)
       
  0.954
ENSCING00000005510
Uncharacterized protein (244 aa)
       
  0.954
ENSCING00000005508
Uncharacterized protein (250 aa)
       
  0.954
gpx_d
Glutathione peroxidase_like protein d precursor (165 aa)
     
 
  0.946
ENSCING00000022619
Uncharacterized protein (175 aa)
     
 
  0.946
gpx7
Glutathione peroxidase 7 precursor (190 aa)
     
 
  0.946
gpx_c
Glutathione peroxidase_like protein c precursor (139 aa)
     
 
  0.946
gsr
Uncharacterized protein (472 aa)
   
  0.940
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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