STRINGSTRING
ENSCING00000001546 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000001546" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000001546Uncharacterized protein (1185 aa)    
Predicted Functional Partners:
cdc40
Uncharacterized protein (504 aa)
     
  0.993
prpf19
Uncharacterized protein (437 aa)
     
  0.993
Cin.32991
Uncharacterized protein (407 aa)
     
  0.988
ENSCING00000006985
Uncharacterized protein (852 aa)
     
  0.987
ENSCING00000007995
Uncharacterized protein (779 aa)
     
  0.986
ENSCING00000002709
Uncharacterized protein (686 aa)
     
  0.986
ENSCING00000008595
Zinc finger protein (CCHC)-12 (568 aa)
     
  0.986
ENSCING00000022206
Uncharacterized protein (486 aa)
     
  0.985
ENSCING00000000716
Uncharacterized protein (276 aa)
     
  0.985
ENSCING00000001601
Uncharacterized protein (144 aa)
     
  0.985
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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