STRINGSTRING
abce1 protein (Ciona intestinalis) - STRING interaction network
"abce1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abce1Uncharacterized protein (600 aa)    
Predicted Functional Partners:
ENSCING00000020776
Uncharacterized protein ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (240 aa)
     
 
  0.920
ENSCING00000002292
Uncharacterized protein (434 aa)
     
 
  0.920
ENSCING00000000723
Uncharacterized protein ; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (311 aa)
     
      0.919
ENSCING00000001979
Uncharacterized protein ; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs (384 aa)
   
 
  0.908
ENSCING00000003743
Uncharacterized protein ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (326 aa)
     
 
  0.874
ENSCING00000004820
Uncharacterized protein ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (1051 aa)
     
      0.869
ENSCING00000005471
Uncharacterized protein (426 aa)
     
 
  0.792
ENSCING00000021567
Uncharacterized protein (671 aa)
     
      0.784
ENSCING00000003620
Uncharacterized protein ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (700 aa)
     
      0.771
ENSCING00000004262
Uncharacterized protein (394 aa)
   
   
  0.760
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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