STRINGSTRING
alr-like protein (Ciona intestinalis) - STRING interaction network
"alr-like" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alr-likeUncharacterized protein (589 aa)    
Predicted Functional Partners:
ENSCING00000006958
Uncharacterized protein (360 aa)
     
  0.981
ENSCING00000008022
Uncharacterized protein (1310 aa)
     
  0.944
ENSCING00000020588
Uncharacterized protein (463 aa)
     
  0.928
ENSCING00000005629
Uncharacterized protein (620 aa)
     
  0.928
ENSCING00000004400
Uncharacterized protein (1887 aa)
     
  0.925
ash2-like
Ash2-like protein (352 aa)
     
  0.909
ENSCING00000014428
Uncharacterized protein (519 aa)
     
  0.902
ENSCING00000007889
Uncharacterized protein (735 aa)
       
    0.902
ENSCING00000011623
Uncharacterized protein (323 aa)
     
 
    0.900
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.814
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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