STRINGSTRING
kat2a protein (Ciona intestinalis) - STRING interaction network
"kat2a" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kat2aUncharacterized protein (709 aa)    
Predicted Functional Partners:
ENSCING00000008712
Uncharacterized protein (423 aa)
     
  0.975
ENSCING00000006364
Uncharacterized protein (386 aa)
     
  0.975
ENSCING00000013825
Uncharacterized protein (181 aa)
     
  0.972
ENSCING00000001931
Uncharacterized protein (409 aa)
     
  0.969
cbp
Uncharacterized protein (1533 aa)
     
  0.968
ENSCING00000001459
Uncharacterized protein (451 aa)
     
  0.967
ENSCING00000012953
Uncharacterized protein (293 aa)
     
  0.966
ENSCING00000000395
Uncharacterized protein ; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription (256 aa)
     
  0.958
trrap
Uncharacterized protein (2944 aa)
     
  0.953
Cin.24169
Uncharacterized protein (187 aa)
     
  0.951
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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