STRINGSTRING
gfpt1 protein (Ciona intestinalis) - STRING interaction network
"gfpt1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gfpt1Uncharacterized protein (689 aa)    
Predicted Functional Partners:
ENSCING00000005785
N-acetylglucosamine-6-phosphate deacetylase (394 aa)
       
  0.941
ENSCING00000005776
Glutamine synthetase (334 aa)
   
 
  0.925
ENSCING00000020728
Amidophosphoribosyltransferase (502 aa)
   
 
0.914
ENSCING00000005335
Mannose-6-phosphate isomerase (408 aa)
     
 
  0.913
ENSCING00000002599
Uncharacterized protein (508 aa)
         
  0.911
ENSCING00000006724
Uncharacterized protein (482 aa)
     
 
  0.909
ENSCING00000022899
Uncharacterized protein (40 aa)
         
    0.900
ENSCING00000022950
Uncharacterized protein (40 aa)
         
    0.900
ENSCING00000013483
Uncharacterized protein (272 aa)
   
 
  0.881
ENSCING00000006372
Uncharacterized protein ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (497 aa)
       
      0.873
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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