STRINGSTRING
ENSCING00000001643 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000001643" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000001643Uncharacterized protein (279 aa)    
Predicted Functional Partners:
ENSCING00000005673
Uncharacterized protein (826 aa)
     
  0.981
ENSCING00000008350
Uncharacterized protein (325 aa)
     
  0.936
ENSCING00000002674
Uncharacterized protein (817 aa)
     
  0.889
ENSCING00000003685
Uncharacterized protein (330 aa)
     
  0.875
ENSCING00000014118
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (262 aa)
     
  0.870
ENSCING00000019272
Uncharacterized protein (362 aa)
     
  0.857
ENSCING00000013290
Uncharacterized protein (221 aa)
     
  0.857
ENSCING00000018569
Uncharacterized protein (870 aa)
       
  0.855
ENSCING00000015205
Uncharacterized protein (219 aa)
     
 
  0.844
ercc3
Excision repair cross-complementing rodent repair deficiency, complementation group 3 (794 aa)
     
 
  0.832
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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