STRINGSTRING
Cin.19484 protein (Ciona intestinalis) - STRING interaction network
"Cin.19484" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.19484Uncharacterized protein (663 aa)    
Predicted Functional Partners:
ENSCING00000009221
Uncharacterized protein (572 aa)
   
0.895
ci-dril1/2
Protein dead ringer homolog ; Transcription factor (571 aa)
     
  0.776
smarcc2
Uncharacterized protein (639 aa)
     
  0.740
ENSCING00000025101
Uncharacterized protein (374 aa)
 
 
  0.714
ENSCING00000024889
Uncharacterized protein (163 aa)
     
  0.692
ENSCING00000009008
Uncharacterized protein (387 aa)
     
  0.666
ENSCING00000009308
Uncharacterized protein (627 aa)
   
0.647
swi/snf
SWI/SNF protein (1003 aa)
   
0.597
ENSCING00000024456
Uncharacterized protein (765 aa)
   
0.597
ENSCING00000013288
Uncharacterized protein (435 aa)
     
  0.592
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (7%) [HD]