STRINGSTRING
ENSCING00000001720 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000001720" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000001720Uncharacterized protein (296 aa)    
Predicted Functional Partners:
ENSCING00000011486
Uncharacterized protein (152 aa)
           
  0.563
ENSCING00000020408
Uncharacterized protein (187 aa)
       
      0.561
ENSCING00000017528
Uncharacterized protein (187 aa)
       
      0.561
ENSCING00000007382
Uncharacterized protein (608 aa)
       
      0.561
ENSCING00000005531
Uncharacterized protein (619 aa)
       
      0.561
ENSCING00000007973
Uncharacterized protein (328 aa)
           
  0.529
ENSCING00000005808
Uncharacterized protein (181 aa)
           
  0.522
ENSCING00000004662
Uncharacterized protein ; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway (183 aa)
         
  0.475
ENSCING00000022637
Uncharacterized protein (63 aa)
           
  0.443
ENSCING00000014196
Uncharacterized protein (462 aa)
           
  0.441
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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