STRINGSTRING
ENSCING00000001778 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000001778" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000001778Uncharacterized protein (181 aa)    
Predicted Functional Partners:
ENSCING00000015910
Uncharacterized protein (231 aa)
       
 
  0.743
ENSCING00000012953
Uncharacterized protein (293 aa)
       
    0.711
ENSCING00000009078
Uncharacterized protein (307 aa)
       
    0.711
ENSCING00000008712
Uncharacterized protein (423 aa)
       
    0.711
ENSCING00000000395
Uncharacterized protein ; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription (256 aa)
       
    0.711
trrap
Uncharacterized protein (2944 aa)
       
  0.694
ENSCING00000001931
Uncharacterized protein (409 aa)
       
    0.684
ENSCING00000001648
Uncharacterized protein (638 aa)
       
 
  0.597
ENSCING00000013825
Uncharacterized protein (181 aa)
       
  0.574
ENSCING00000001459
Uncharacterized protein (451 aa)
       
    0.566
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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