STRINGSTRING
ENSCING00000001905 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000001905" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000001905Uncharacterized protein (156 aa)    
Predicted Functional Partners:
ENSCING00000009386
Uncharacterized protein (448 aa)
     
 
  0.586
ENSCING00000009385
Uncharacterized protein (207 aa)
     
 
  0.586
ENSCING00000004383
Uncharacterized protein (512 aa)
         
  0.577
ENSCING00000021194
Uncharacterized protein (526 aa)
         
  0.577
ENSCING00000008044
Uncharacterized protein (515 aa)
         
  0.577
ENSCING00000008012
Uncharacterized protein (524 aa)
         
  0.577
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
           
  0.573
acl
ATP citrate-lyase (404 aa)
       
  0.557
ENSCING00000002572
Uncharacterized protein (731 aa)
     
   
  0.512
ENSCING00000007699
Uncharacterized protein (983 aa)
           
  0.508
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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