STRINGSTRING
ddx23 protein (Ciona intestinalis) - STRING interaction network
"ddx23" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddx23Uncharacterized protein (779 aa)    
Predicted Functional Partners:
ENSCING00000022206
Uncharacterized protein (486 aa)
     
  0.983
ENSCING00000020031
Uncharacterized protein (118 aa)
     
  0.981
ENSCING00000019152
Uncharacterized protein (82 aa)
     
  0.981
ENSCING00000002709
Uncharacterized protein (686 aa)
     
  0.939
ENSCING00000001299
Uncharacterized protein (508 aa)
     
  0.932
ENSCING00000016042
Uncharacterized protein (167 aa)
     
  0.931
ENSCING00000024924
Uncharacterized protein (112 aa)
     
  0.931
snrnp200
Uncharacterized protein (2140 aa)
     
  0.931
Cin.24608
Uncharacterized protein (95 aa)
     
  0.916
ENSCING00000006985
Uncharacterized protein (852 aa)
     
  0.909
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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