STRINGSTRING
ENSCING00000001979 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000001979" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000001979Uncharacterized protein ; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs (384 aa)    
Predicted Functional Partners:
hbs1l
Uncharacterized protein (711 aa)
     
  0.986
ENSCING00000007500
Uncharacterized protein (554 aa)
     
  0.914
abce1
Uncharacterized protein (600 aa)
   
 
  0.908
eef1a2
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (467 aa)
     
  0.823
ENSCING00000021478
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (460 aa)
     
  0.823
eef1a1
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (469 aa)
     
  0.823
ENSCING00000005126
Elongation factor 1-alpha ; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (464 aa)
     
  0.823
ENSCING00000014899
Uncharacterized protein (133 aa)
       
 
  0.701
ENSCING00000000723
Uncharacterized protein ; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (311 aa)
     
      0.637
ENSCING00000008272
Uncharacterized protein (626 aa)
     
      0.565
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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