STRINGSTRING
scfd1 protein (Ciona intestinalis) - STRING interaction network
"scfd1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scfd1Uncharacterized protein (622 aa)    
Predicted Functional Partners:
ENSCING00000010411
Uncharacterized protein (310 aa)
     
  0.993
ENSCING00000009600
Uncharacterized protein (214 aa)
     
  0.986
ENSCING00000024830
Uncharacterized protein (295 aa)
     
  0.983
ENSCING00000014739
Uncharacterized protein (181 aa)
     
  0.981
ENSCING00000023521
Uncharacterized protein (102 aa)
     
  0.976
nsf
Uncharacterized protein (461 aa)
     
  0.976
ENSCING00000004501
Uncharacterized protein (291 aa)
     
  0.973
ENSCING00000006687
Uncharacterized protein (104 aa)
     
  0.972
ENSCING00000004856
Uncharacterized protein (200 aa)
     
  0.970
ENSCING00000017493
Uncharacterized protein (222 aa)
     
  0.969
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (11%) [HD]