STRINGSTRING
cytb561 protein (Ciona intestinalis) - STRING interaction network
"cytb561" - Cytochrome b561 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cytb561Cytochrome b561 (254 aa)    
Predicted Functional Partners:
ENSCING00000008349
Uncharacterized protein (619 aa)
           
  0.580
ENSCING00000016071
Uncharacterized protein (455 aa)
           
  0.461
Cin.20276
Uncharacterized protein (474 aa)
           
  0.461
ENSCING00000003566
Uncharacterized protein (426 aa)
           
  0.461
ENSCING00000005459
Uncharacterized protein (266 aa)
           
  0.453
ENSCING00000008854
Uncharacterized protein (741 aa)
     
   
  0.440
ENSCING00000010630
Uncharacterized protein (284 aa)
           
  0.420
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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