STRINGSTRING
nmd3 protein (Ciona intestinalis) - STRING interaction network
"nmd3" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nmd3Uncharacterized protein (501 aa)    
Predicted Functional Partners:
gtpbp4
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (639 aa)
     
 
  0.992
gmps
Uncharacterized protein (688 aa)
     
        0.990
ENSCING00000010738
Uncharacterized protein (538 aa)
     
 
  0.982
ENSCING00000016546
Uncharacterized protein (71 aa)
     
 
  0.982
ENSCING00000007079
Uncharacterized protein (460 aa)
     
 
  0.975
ENSCING00000006069
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (786 aa)
     
   
  0.973
Cin.34402
Uncharacterized protein (534 aa)
     
 
  0.968
sdad1
Uncharacterized protein (680 aa)
     
 
  0.964
pwp2
Uncharacterized protein (721 aa)
     
   
  0.962
ENSCING00000004262
Uncharacterized protein (394 aa)
     
 
  0.961
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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