STRINGSTRING
en protein (Ciona intestinalis) - STRING interaction network
"en" - En protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
enEn protein (345 aa)    
Predicted Functional Partners:
pbx
Transcription factor protein (446 aa)
       
 
  0.596
otx2
Otx (425 aa)
     
   
  0.591
ENSCING00000005406
Neuralized-a protein (544 aa)
           
  0.587
gli
Transcription factor protein (1098 aa)
     
 
  0.584
hh2
Hedgehog homolog 2 precursor (312 aa)
     
   
  0.580
hh1
Hedgehog homolog 1 ; Intercellular signal essential for a variety of patterning events during development (557 aa)
     
   
  0.580
bra
Transcription factor protein (439 aa)
       
 
  0.575
pax6
Homeobox transcription factor Pax6 (497 aa)
     
 
  0.575
bmp2/4
Transforming growth factor beta superfamily signaling ligand precursor (376 aa)
     
   
  0.550
wnt5
Wnt signaling ligand precursor ; Ligand for members of the frizzled family of seven transmembrane receptors (360 aa)
     
   
  0.509
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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