STRINGSTRING
hmg2-like protein (Ciona intestinalis) - STRING interaction network
"hmg2-like" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmg2-likeTranscription factor protein (510 aa)    
Predicted Functional Partners:
zf(phd)-2
Uncharacterized protein (818 aa)
       
    0.947
ENSCING00000007774
Uncharacterized protein (405 aa)
       
      0.552
ENSCING00000003363
Uncharacterized protein (740 aa)
           
  0.533
rbbp4
Uncharacterized protein (431 aa)
       
    0.528
zf(cxxc)-2
Zinc finger protein (410 aa)
       
    0.464
ENSCING00000022035
Uncharacterized protein (309 aa)
     
   
  0.442
nemo-like
Nemo-Like kinase (403 aa)
           
  0.436
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (9%) [HD]