STRINGSTRING
ENSCING00000002281 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000002281" - scalloped/TEF1 protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000002281scalloped/TEF1 protein (350 aa)    
Predicted Functional Partners:
ENSCING00000018856
Uncharacterized protein (450 aa)
     
  0.952
ENSCING00000005913
Uncharacterized protein (304 aa)
       
 
  0.880
ENSCING00000024842
Uncharacterized protein (446 aa)
       
  0.858
ENSCING00000014835
E3 ubiquitin-protein ligase (910 aa)
       
  0.858
ENSCING00000007996
E3 ubiquitin-protein ligase (752 aa)
       
  0.858
nedd4l
E3 ubiquitin-protein ligase (871 aa)
       
  0.858
ENSCING00000002155
Uncharacterized protein (215 aa)
       
  0.858
ENSCING00000019408
Uncharacterized protein (85 aa)
 
            0.713
LOC494359
Uncharacterized protein (269 aa)
       
      0.670
ENSCING00000022202
Uncharacterized protein (237 aa)
       
      0.670
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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