STRINGSTRING
ENSCING00000002386 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000002386" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000002386Uncharacterized protein (194 aa)    
Predicted Functional Partners:
ENSCING00000006610
60S ribosome subunit biogenesis protein NIP7 homolog ; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)
     
        0.960
ENSCING00000011628
Uncharacterized protein (119 aa)
     
      0.921
ENSCING00000001858
Uncharacterized protein (225 aa)
     
      0.817
ENSCING00000002177
Uncharacterized protein (324 aa)
     
        0.809
ENSCING00000000481
Uncharacterized protein (226 aa)
     
        0.806
ENSCING00000008090
Uncharacterized protein (308 aa)
     
        0.804
ENSCING00000013374
Uncharacterized protein (177 aa)
     
        0.804
tsr1
Uncharacterized protein (784 aa)
     
 
  0.789
sdad1
Uncharacterized protein (680 aa)
     
   
  0.768
ENSCING00000019127
KRR1 small subunit processome component ; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (358 aa)
     
      0.759
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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