STRINGSTRING
zf(zz)-1 protein (Ciona intestinalis) - STRING interaction network
"zf(zz)-1" - Zinc finger protein 1 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(zz)-1Zinc finger protein 1 (1039 aa)    
Predicted Functional Partners:
ENSCING00000012953
Uncharacterized protein (293 aa)
     
  0.952
ENSCING00000008712
Uncharacterized protein (423 aa)
     
  0.942
ENSCING00000006958
Uncharacterized protein (360 aa)
       
  0.905
ENSCING00000007170
Uncharacterized protein (960 aa)
     
  0.886
ENSCING00000008216
Uncharacterized protein (702 aa)
     
  0.883
ENSCING00000001459
Uncharacterized protein (451 aa)
       
  0.836
kat2b
Uncharacterized protein (365 aa)
     
  0.822
kat2a
Uncharacterized protein (709 aa)
     
  0.822
ENSCING00000020364
Uncharacterized protein (145 aa)
     
  0.803
cbf-2
Transcription factor CBF/NF-Y/archaeal histone -2 (156 aa)
     
  0.732
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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