STRINGSTRING
chat protein (Ciona intestinalis) - STRING interaction network
"chat" - Choline acetyltransferase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chatCholine acetyltransferase (759 aa)    
Predicted Functional Partners:
ENSCING00000007566
Uncharacterized protein (382 aa)
     
 
  0.905
ENSCING00000008209
Uncharacterized protein (250 aa)
     
   
  0.902
ENSCING00000022221
Uncharacterized protein (374 aa)
         
    0.900
hsd17b4
Uncharacterized protein (720 aa)
     
 
  0.859
ENSCING00000024810
Uncharacterized protein (133 aa)
     
 
  0.855
ENSCING00000010459
Uncharacterized protein ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (385 aa)
       
 
  0.672
vachtp
Vesicular acetylcholine transporter (657 aa)
     
   
  0.600
ENSCING00000024849
Acyl-coenzyme A oxidase (672 aa)
     
 
  0.572
acox1
Acyl-coenzyme A oxidase (660 aa)
     
 
  0.572
acox2
Acyl-coenzyme A oxidase (671 aa)
     
 
  0.572
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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