STRINGSTRING
ENSCING00000002582 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000002582" - 60S ribosomal protein L13 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING0000000258260S ribosomal protein L13 (220 aa)    
Predicted Functional Partners:
ENSCING00000008155
Uncharacterized protein (123 aa)
     
  0.999
ENSCING00000011581
Uncharacterized protein (160 aa)
     
  0.999
ENSCING00000008014
Uncharacterized protein (281 aa)
     
  0.998
ENSCING00000000891
Ribosomal protein (216 aa)
     
  0.998
ENSCING00000009395
Uncharacterized protein (268 aa)
     
  0.998
ENSCING00000005034
Uncharacterized protein (151 aa)
     
  0.998
ENSCING00000005003
Uncharacterized protein (263 aa)
     
  0.998
ENSCING00000003326
Uncharacterized protein (178 aa)
     
  0.998
ENSCING00000014933
Uncharacterized protein (147 aa)
     
  0.998
ENSCING00000002448
Uncharacterized protein (204 aa)
     
  0.998
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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