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ENSCING00000002653 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000002653" - Zn-finger in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000002653Zn-finger (U1-like)-8 (516 aa)    
Predicted Functional Partners:
ENSCING00000004045
Uncharacterized protein (368 aa)
     
 
  0.618
ENSCING00000021483
Uncharacterized protein (184 aa)
 
            0.558
ENSCING00000013019
Uncharacterized protein (1105 aa)
       
      0.465
ENSCING00000008843
Uncharacterized protein (376 aa)
       
      0.465
ENSCING00000007520
Uncharacterized protein (909 aa)
       
 
  0.462
ENSCING00000016009
Uncharacterized protein (234 aa)
           
  0.440
ENSCING00000007289
Uncharacterized protein (481 aa)
       
 
  0.430
ENSCING00000005697
Uncharacterized protein (266 aa)
     
   
  0.415
ENSCING00000011486
Uncharacterized protein (152 aa)
           
  0.414
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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