STRINGSTRING
ENSCING00000002711 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000002711" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000002711Uncharacterized protein (611 aa)    
Predicted Functional Partners:
ENSCING00000021101
Uncharacterized protein (172 aa)
       
      0.960
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.573
dnajc10
Uncharacterized protein (817 aa)
   
   
  0.524
ENSCING00000008174
S-adenosylmethionine synthase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (400 aa)
         
  0.446
ccdc40
Uncharacterized protein (864 aa)
           
  0.434
ENSCING00000000830
Uncharacterized protein (174 aa)
     
   
  0.428
ENSCING00000014238
Uncharacterized protein (241 aa)
           
  0.428
ENSCING00000002537
Uncharacterized protein (914 aa)
     
   
  0.426
ENSCING00000007504
Uncharacterized protein (660 aa)
   
   
  0.423
ENSCING00000003958
Uncharacterized protein (425 aa)
     
   
  0.414
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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