STRINGSTRING
tnks protein (Ciona intestinalis) - STRING interaction network
"tnks" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnksUncharacterized protein (538 aa)    
Predicted Functional Partners:
ENSCING00000020223
Uncharacterized protein (189 aa)
       
      0.926
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.779
ENSCING00000019008
Uncharacterized protein (193 aa)
     
  0.737
ENSCING00000005522
Uncharacterized protein (720 aa)
     
  0.736
axin
Axin protein (643 aa)
     
  0.723
ENSCING00000006425
Uncharacterized protein (370 aa)
     
  0.716
psmc6
Uncharacterized protein (393 aa)
     
  0.712
ENSCING00000006038
Uncharacterized protein (398 aa)
     
  0.708
ENSCING00000005748
Uncharacterized protein (433 aa)
       
  0.707
ENSCING00000005232
Uncharacterized protein (458 aa)
     
  0.706
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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