STRINGSTRING
Cin.53571 protein (Ciona intestinalis) - STRING interaction network
"Cin.53571" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.53571Uncharacterized protein (154 aa)    
Predicted Functional Partners:
ENSCING00000019661
Uncharacterized protein (269 aa)
     
 
  0.677
ENSCING00000024330
Uncharacterized protein (379 aa)
   
 
  0.647
ENSCING00000008288
Uncharacterized protein (379 aa)
   
 
  0.647
ENSCING00000005935
Uncharacterized protein (720 aa)
   
 
  0.647
ENSCING00000023627
Uncharacterized protein (306 aa)
     
 
  0.597
ENSCING00000018912
Uncharacterized protein (306 aa)
     
 
  0.597
ENSCING00000007113
Uncharacterized protein (393 aa)
     
 
  0.593
ENSCING00000003950
Uncharacterized protein (372 aa)
     
 
  0.593
ENSCING00000011998
Uncharacterized protein (436 aa)
     
 
  0.534
ENSCING00000018311
Uncharacterized protein (325 aa)
     
   
  0.530
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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