STRINGSTRING
LOC494378 protein (Ciona intestinalis) - STRING interaction network
"LOC494378" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC494378Uncharacterized protein ; Converts sphingomyelin to ceramide (599 aa)    
Predicted Functional Partners:
ENSCING00000002461
Uncharacterized protein (392 aa)
     
  0.937
ENSCING00000019121
Uncharacterized protein (518 aa)
     
 
  0.931
ENSCING00000007924
Uncharacterized protein (561 aa)
     
 
  0.931
ENSCING00000008365
Uncharacterized protein (401 aa)
         
  0.911
ENSCING00000003478
Non-lysosomal glucosylceramidase ; Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide (785 aa)
         
  0.906
lag1-like1
Transcription factor protein (382 aa)
         
  0.905
ENSCING00000006470
Uncharacterized protein (383 aa)
         
  0.905
ENSCING00000005453
Uncharacterized protein (688 aa)
         
  0.905
ENSCING00000001483
Uncharacterized protein (335 aa)
         
  0.905
galc
Uncharacterized protein (677 aa)
         
  0.903
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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