STRINGSTRING
sos1 protein (Ciona intestinalis) - STRING interaction network
"sos1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sos1Uncharacterized protein (846 aa)    
Predicted Functional Partners:
ENSCING00000005670
Uncharacterized protein (231 aa)
       
  0.996
ENSCING00000016031
Uncharacterized protein (152 aa)
       
  0.987
ENSCING00000003686
Uncharacterized protein (599 aa)
     
  0.938
ENSCING00000023365
Uncharacterized protein (196 aa)
     
  0.923
rap1b
Ras-related protein RAP-1B homologue (184 aa)
     
  0.867
ENSCING00000002194
Uncharacterized protein (183 aa)
     
  0.839
rcl1
Rac and Cdc42-like 1 protein (194 aa)
       
  0.839
LOC445702
Rac1 protein (192 aa)
       
  0.839
ENSCING00000021946
Uncharacterized protein (199 aa)
     
  0.838
ENSCING00000023267
Uncharacterized protein (195 aa)
     
  0.838
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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