STRINGSTRING
ENSCING00000002822 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000002822" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000002822Uncharacterized protein (1027 aa)    
Predicted Functional Partners:
ENSCING00000003537
Uncharacterized protein (824 aa)
     
   
  0.798
ENSCING00000024069
Uncharacterized protein (90 aa)
     
   
  0.656
Cin.21688
Uncharacterized protein (251 aa)
     
   
  0.656
ect2
Uncharacterized protein (782 aa)
     
   
  0.605
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
   
  0.577
ENSCING00000021020
Uncharacterized protein (234 aa)
     
   
  0.554
ENSCING00000023397
Uncharacterized protein (378 aa)
     
   
  0.538
ENSCING00000023678
Uncharacterized protein (203 aa)
     
        0.513
ENSCING00000001375
Uncharacterized protein (416 aa)
       
 
  0.494
ENSCING00000013061
Uncharacterized protein (344 aa)
     
      0.464
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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