STRINGSTRING
ENSCING00000002830 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000002830" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000002830Uncharacterized protein (473 aa)    
Predicted Functional Partners:
ENSCING00000015162
Uncharacterized protein (249 aa)
   
 
  0.968
ENSCING00000017945
Uncharacterized protein (235 aa)
   
  0.960
ENSCING00000006135
Uncharacterized protein (214 aa)
   
  0.931
ENSCING00000018824
Uncharacterized protein (278 aa)
       
  0.589
ENSCING00000000245
Uncharacterized protein (404 aa)
       
  0.589
gmps
Uncharacterized protein (688 aa)
         
  0.586
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.524
ENSCING00000005522
Uncharacterized protein (720 aa)
   
   
  0.515
pnpla6
Uncharacterized protein (947 aa)
   
   
  0.492
ENSCING00000006215
Uncharacterized protein (1922 aa)
   
 
  0.485
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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