STRINGSTRING
ENSCING00000002837 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000002837" - Zinc finger protein Ci-ArfGAP-3 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000002837Zinc finger protein Ci-ArfGAP-3 (760 aa)    
Predicted Functional Partners:
ENSCING00000001710
Uncharacterized protein (527 aa)
     
  0.979
rcl1
Rac and Cdc42-like 1 protein (194 aa)
       
  0.599
LOC445702
Rac1 protein (192 aa)
       
  0.599
ENSCING00000007947
Uncharacterized protein (428 aa)
       
  0.570
ENSCING00000016554
Uncharacterized protein (469 aa)
       
  0.569
ENSCING00000007043
Uncharacterized protein (619 aa)
     
  0.565
ENSCING00000022729
Uncharacterized protein (508 aa)
       
  0.562
ENSCING00000008550
Uncharacterized protein (467 aa)
       
  0.556
ENSCING00000003255
Uncharacterized protein (440 aa)
       
  0.556
ephe
Ephrin receptor epsilon precursor (1006 aa)
       
  0.546
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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