STRINGSTRING
ENSCING00000002888 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000002888" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000002888Uncharacterized protein (266 aa)    
Predicted Functional Partners:
ENSCING00000006610
60S ribosome subunit biogenesis protein NIP7 homolog ; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)
     
        0.960
ENSCING00000018165
Uncharacterized protein (114 aa)
     
 
  0.887
ENSCING00000012967
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (427 aa)
     
        0.861
ENSCING00000019127
KRR1 small subunit processome component ; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (358 aa)
     
        0.857
ENSCING00000007514
Uncharacterized protein (351 aa)
     
        0.852
ENSCING00000012577
Uncharacterized protein (222 aa)
     
        0.830
ENSCING00000002871
Uncharacterized protein (288 aa)
     
        0.811
ENSCING00000008090
Uncharacterized protein (308 aa)
     
        0.804
ENSCING00000001695
Uncharacterized protein (264 aa)
     
        0.804
ENSCING00000010738
Uncharacterized protein (538 aa)
     
      0.782
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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