STRINGSTRING
Cin.29734 protein (Ciona intestinalis) - STRING interaction network
"Cin.29734" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.29734Uncharacterized protein (192 aa)    
Predicted Functional Partners:
ENSCING00000022955
Uncharacterized protein (801 aa)
     
  0.980
upf1
Uncharacterized protein (836 aa)
     
  0.980
ENSCING00000008396
Uncharacterized protein (197 aa)
     
  0.961
ENSCING00000007500
Uncharacterized protein (554 aa)
     
  0.807
ENSCING00000018708
Uncharacterized protein (1528 aa)
     
  0.807
ENSCING00000023900
Uncharacterized protein (540 aa)
     
  0.804
ENSCING00000020418
Uncharacterized protein (361 aa)
     
  0.804
ENSCING00000024313
Uncharacterized protein (206 aa)
     
  0.804
ENSCING00000019078
Uncharacterized protein (265 aa)
     
  0.804
ENSCING00000018899
Uncharacterized protein (281 aa)
     
  0.804
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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