STRINGSTRING
LOC494375 protein (Ciona intestinalis) - STRING interaction network
"LOC494375" - Toll-like receptor 7-like precursor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC494375Toll-like receptor 7-like precursor (933 aa)    
Predicted Functional Partners:
ENSCING00000009957
Uncharacterized protein (87 aa)
       
  0.919
ENSCING00000020502
Zinc finger protein (579 aa)
       
  0.908
ENSCING00000014779
Uncharacterized protein (339 aa)
       
  0.878
Tak1
Mitogen-activated protein kinase kinase kinase (190 aa)
     
  0.828
ENSCING00000003713
Uncharacterized protein (490 aa)
     
  0.779
ENSCING00000001546
Uncharacterized protein (1185 aa)
     
  0.775
ENSCING00000023002
Uncharacterized protein (233 aa)
     
  0.774
ENSCING00000007647
Uncharacterized protein (262 aa)
     
  0.774
ENSCING00000007470
Uncharacterized protein (478 aa)
     
  0.748
Cin.21140
Uncharacterized protein (275 aa)
     
  0.709
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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