STRINGSTRING
Cin.40146 protein (Ciona intestinalis) - STRING interaction network
"Cin.40146" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.40146Uncharacterized protein (213 aa)    
Predicted Functional Partners:
ENSCING00000022457
Uncharacterized protein (366 aa)
       
      0.811
ENSCING00000014345
Ubiquitin carboxyl-terminal hydrolase (423 aa)
       
      0.811
ar20
Ar20 protein ; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament (168 aa)
       
  0.806
ENSCING00000025000
Uncharacterized protein (216 aa)
     
  0.792
ENSCING00000023407
Uncharacterized protein (154 aa)
       
  0.760
ENSCING00000020798
Uncharacterized protein (161 aa)
       
  0.760
ENSCING00000020643
Uncharacterized protein (153 aa)
       
  0.760
ENSCING00000018160
Uncharacterized protein (148 aa)
       
  0.760
ENSCING00000022055
Uncharacterized protein (157 aa)
       
  0.760
ENSCING00000015157
Uncharacterized protein (171 aa)
       
  0.760
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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