STRINGSTRING
fat1 protein (Ciona intestinalis) - STRING interaction network
"fat1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fat1Uncharacterized protein (4153 aa)    
Predicted Functional Partners:
ENSCING00000007020
Uncharacterized protein (273 aa)
       
  0.924
CTNNB1
Beta-catenin (497 aa)
       
  0.924
ctnna2
Uncharacterized protein (899 aa)
     
  0.772
ENSCING00000009569
Uncharacterized protein (1202 aa)
       
 
  0.672
ENSCING00000024611
Uncharacterized protein (2009 aa)
       
 
  0.653
ENSCING00000016188
Uncharacterized protein (372 aa)
       
 
  0.643
ENSCING00000014076
Uncharacterized protein (154 aa)
       
 
  0.643
ENSCING00000008815
Uncharacterized protein (572 aa)
       
 
  0.643
ENSCING00000011323
Uncharacterized protein (142 aa)
     
 
  0.605
ENSCING00000019589
Uncharacterized protein (147 aa)
     
  0.555
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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