STRINGSTRING
ENSCING00000018343 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000018343" - Isocitrate dehydrogenase [NADP] in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000018343Isocitrate dehydrogenase [NADP] (414 aa)    
Predicted Functional Partners:
ENSCING00000007286
Uncharacterized protein (370 aa)
   
  0.985
ENSCING00000007491
Uncharacterized protein (398 aa)
   
  0.981
ENSCING00000004407
Uncharacterized protein (353 aa)
   
  0.981
aco1
Uncharacterized protein ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (892 aa)
   
  0.981
ENSCING00000021189
Uncharacterized protein (264 aa)
     
 
  0.965
ENSCING00000009647
Glutamate dehydrogenase (443 aa)
     
  0.927
ENSCING00000007260
Glutamate dehydrogenase (505 aa)
     
  0.927
acl
ATP citrate-lyase (404 aa)
   
   
  0.901
ENSCING00000008364
Aspartate aminotransferase (415 aa)
     
  0.901
ENSCING00000003669
Aspartate aminotransferase (425 aa)
     
  0.901
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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