STRINGSTRING
LOC494391 protein (Ciona intestinalis) - STRING interaction network
"LOC494391" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC494391Uncharacterized protein (1026 aa)    
Predicted Functional Partners:
eif2ak4
Uncharacterized protein (1156 aa)
     
 
0.841
ENSCING00000009590
Uncharacterized protein (659 aa)
     
  0.659
if5-1
Translation initiation factor (267 aa)
     
 
  0.642
xbpa
Transcription factor protein (309 aa)
           
  0.577
atf4/5
Transcription factor protein (340 aa)
         
  0.556
dnajc10
Uncharacterized protein (817 aa)
       
  0.521
ENSCING00000019934
Uncharacterized protein (169 aa)
     
  0.514
ENSCING00000013424
Uncharacterized protein (332 aa)
     
  0.514
ENSCING00000009665
Uncharacterized protein (664 aa)
     
  0.511
ENSCING00000013923
Uncharacterized protein (190 aa)
     
   
  0.506
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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