STRINGSTRING
ENSCING00000003118 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003118" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003118Uncharacterized protein (278 aa)    
Predicted Functional Partners:
hox2
Transcription factor protein; Uncharacterized protein (114 aa)
       
 
  0.933
hox5
Hox 5 (220 aa)
       
 
  0.688
ENSCING00000023524
Uncharacterized protein (79 aa)
       
 
  0.677
mox
Transcription factor protein (176 aa)
       
 
  0.677
hox3
Homeoprotein 3 (733 aa)
       
 
  0.677
hox4
Hox4 protein (335 aa)
       
 
  0.677
mnx
Transcription factor HB9 (409 aa)
       
 
  0.677
hoxa2
Gsx (349 aa)
       
 
  0.677
hox1
Homeobox transcription factor Hox1 (365 aa)
       
 
  0.677
ipf1
Transcription factor (411 aa)
       
 
  0.677
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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