STRINGSTRING
ENSCING00000003086 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003086" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003086Uncharacterized protein (504 aa)    
Predicted Functional Partners:
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
 
  0.985
ENSCING00000009238
Uncharacterized protein (834 aa)
     
      0.952
ppan
Suppressor of SWI4 1 homolog (453 aa)
     
      0.916
ENSCING00000019652
Uncharacterized protein (379 aa)
       
 
  0.827
ENSCING00000017967
Uncharacterized protein (163 aa)
     
  0.803
ENSCING00000021036
Uncharacterized protein (549 aa)
     
 
  0.789
Cin.29239
Uncharacterized protein (622 aa)
     
 
  0.789
supt16h
Uncharacterized protein (1035 aa)
     
  0.716
ENSCING00000002232
Uncharacterized protein (1194 aa)
     
 
  0.692
cdc45
Cdc45 protein (249 aa)
     
  0.658
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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