STRINGSTRING
rhoa protein (Ciona intestinalis) - STRING interaction network
"rhoa" - RhoA protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhoaRhoA protein (193 aa)    
Predicted Functional Partners:
ENSCING00000014936
Uncharacterized protein (93 aa)
     
  0.987
ENSCING00000007425
Uncharacterized protein (420 aa)
       
  0.980
ENSCING00000009071
Uncharacterized protein (943 aa)
     
  0.978
ENSCING00000021169
Uncharacterized protein (223 aa)
     
  0.968
Cin.32434
Uncharacterized protein (236 aa)
     
  0.968
prkca
Protein kinase C (657 aa)
     
  0.968
ENSCING00000006310
Uncharacterized protein (937 aa)
       
  0.961
ENSCING00000003143
Uncharacterized protein (1324 aa)
       
  0.946
ENSCING00000018289
Uncharacterized protein (1694 aa)
       
  0.923
ENSCING00000023969
Uncharacterized protein (245 aa)
       
  0.911
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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