STRINGSTRING
uglcat1 protein (Ciona intestinalis) - STRING interaction network
"uglcat1" - Beta-1,3-glucuronosyltransferase in Ciona intestinalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uglcat1Beta-1,3-glucuronosyltransferase (340 aa)    
Predicted Functional Partners:
b3galt6
Beta-1,3-galactosyltransferase 6 (327 aa)
     
 
  0.956
Cin.26141
Uncharacterized protein (416 aa)
         
  0.931
perlecan
Uncharacterized protein (502 aa)
         
  0.614
ENSCING00000012316
Uncharacterized protein (136 aa)
     
   
  0.602
b4gal-t7
Uncharacterized protein (259 aa)
     
   
  0.602
ENSCING00000001850
Uncharacterized protein ; Cell surface proteoglycan that bears heparan sulfate (521 aa)
         
  0.601
ENSCING00000007266
Uncharacterized protein (317 aa)
     
   
  0.593
ENSCING00000024012
Uncharacterized protein (408 aa)
     
   
  0.587
xt
Xylosyltransferase ; Catalyzes the first step in biosynthesis of glycosaminoglycan. Transfers D-xylose from UDP-D-xylose to specific serine residues of the core protein. Initial enzyme in the biosynthesis of chondroitin sulfate and dermatan sulfate proteoglycans in fibroblasts and chondrocytes (848 aa)
     
   
  0.581
ENSCING00000019083
Uncharacterized protein (340 aa)
           
  0.565
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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