STRINGSTRING
ENSCING00000003257 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003257" - Peptidyl-prolyl cis-trans isomerase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003257Peptidyl-prolyl cis-trans isomerase (418 aa)    
Predicted Functional Partners:
dnajc10
Uncharacterized protein (817 aa)
   
 
  0.662
ENSCING00000022174
Uncharacterized protein (181 aa)
 
            0.645
ENSCING00000013374
Uncharacterized protein (177 aa)
     
      0.610
ENSCING00000006069
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (786 aa)
     
      0.550
ENSCING00000001858
Uncharacterized protein (225 aa)
     
 
  0.541
ENSCING00000005419
Uncharacterized protein (754 aa)
     
      0.533
ENSCING00000001695
Uncharacterized protein (264 aa)
     
      0.493
gtpbp4
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (639 aa)
     
      0.490
ENSCING00000024199
Uncharacterized protein (562 aa)
     
      0.485
ENSCING00000006610
60S ribosome subunit biogenesis protein NIP7 homolog ; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)
     
      0.482
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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