STRINGSTRING
ENSCING00000003306 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003306" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003306Uncharacterized protein (330 aa)    
Predicted Functional Partners:
ENSCING00000012518
Uncharacterized protein (805 aa)
     
 
  0.905
cdc40
Uncharacterized protein (504 aa)
   
   
0.903
prpf19
Uncharacterized protein (437 aa)
   
 
   
0.889
mapkk1/2
Mitogen-activated protein kinase kinase (377 aa)
       
  0.566
dhx35
Uncharacterized protein (661 aa)
     
      0.564
ENSCING00000003017
Uncharacterized protein (240 aa)
     
      0.563
ENSCING00000011490
Uncharacterized protein ; Phosphodiesterase responsible for the U6 snRNA 3’ end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA (262 aa)
       
      0.561
erk1/2
Mitogen-activated protein kinase (350 aa)
     
    0.547
ENSCING00000000988
Uncharacterized protein (243 aa)
       
      0.545
ENSCING00000006985
Uncharacterized protein (852 aa)
       
      0.545
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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